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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs11652603 chr17:45864620 G/A 3.53E-5 488 15.13 16.93 16.3 KM Plot
THCA rs11655306 chr17:45858744 C/T 3.4E-5 488 15.17 16.93 16.3 KM Plot
THCA rs11663286 chr18:24516694 A/T 1.11E-9 490 15.65 17.03 17.77 KM Plot
THCA rs116649391 chr11:62611807 A/G 7.86E-5 490 16.23 14.17 14.27 KM Plot
THCA rs11667487 chr19:18351207 A/G 0.000289 490 18.9 15.57 15.67 KM Plot
THCA rs11668304 chr19:15868246 C/A 0.00031 490 16.3 14.93 19.13 KM Plot
THCA rs11671910 chr19:34408340 G/A 1.17E-5 483 15.8 15.73 17.63 KM Plot
THCA rs11673391 chr19:15868360 T/G 7.41E-5 490 16.3 14.93 15.62 KM Plot
THCA rs116776334 chr6:151703965 T/C 0.000233 486 15.17 18.18 17.23 KM Plot
THCA rs11681243 chr2:48251156 G/T 0.000211 490 15.32 17.23 7.77 KM Plot
THCA rs116848883 chr4:39476146 G/A 4.44E-15 489 15.9 17.63 6.1 KM Plot
THCA rs11687800 chr2:29022959 T/C 0.000118 489 15.32 17.93 14.98 KM Plot
THCA rs116883393 chr12:9472523 G/A 0.000189 485 15.67 16.67 16.82 KM Plot
THCA rs116884206 chr10:81990546 A/G 8.61E-5 479 16.22 15.83 9.77 KM Plot
THCA rs116895098 chr19:43601412 A/C 0.000229 481 15.67 18.93 10.08 KM Plot